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PAC001585_s group (Species)

Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Pseudoflavonifractor; PAC001585_s group;

This taxon was found in 0.67% of laboratory mice cecum, 0.27% of laboratory mice feces (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS5679033 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 40 1.73
SRS876806 SRP056326 Feces C57BL/6 Envigo Laboratory 690 1.13
SRS876808 SRP056326 Feces C57BL/6 Envigo Laboratory 584 0.98
SRS876843 SRP056326 Feces C57BL/6 Envigo Laboratory 560 0.96
SRS5679026 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 46 0.90
SRS940649 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 192 0.88
SRS940871 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 102 0.78
SRS876903 SRP056326 Feces C57BL/6 Envigo Laboratory 365 0.69
SRS876809 SRP056326 Feces C57BL/6 Envigo Laboratory 430 0.67
SRS5679057 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 45 0.67
SRS5679077 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 27 0.59
SRS5679034 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 27 0.57
SRS941143 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 118 0.50
SRS941681 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 145 0.49
SRS5679032 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 15 0.48
SRS5679080 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 21 0.47
SRS2529850 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 105 0.43
SRS2529848 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 105 0.43
SRS876904 SRP056326 Feces C57BL/6 Envigo Laboratory 243 0.43
SRS5679023 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 15 0.39
SRS2290234 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 75 0.36
SRS876950 SRP056326 Feces C57BL/6 Envigo Laboratory 181 0.30
SRS940859 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 83 0.28
SRS2529845 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 81 0.28
SRS5679024 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 10 0.27
SRS2290159 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 31 0.26
SRS5679029 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 13 0.26
SRS2290201 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 78 0.24
SRS876902 SRP056326 Feces C57BL/6 Envigo Laboratory 119 0.23
SRS2529843 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 69 0.22
SRS5679030 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 7 0.21
SRS5679079 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 10 0.21
SRS2290242 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 20 0.19
ERS2715835 ERP110263 Colon C57BL/6 Envigo Laboratory 85 0.18
SRS876901 SRP056326 Feces C57BL/6 Envigo Laboratory 64 0.13
SRS5679078 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 5 0.13
ERS2716613 ERP110263 Jejunum C57BL/6 Envigo Laboratory 69 0.13
ERS2715768 ERP110263 Colon C57BL/6 Envigo Laboratory 72 0.11
ERS2715969 ERP110263 Cecum C57BL/6 Envigo Laboratory 62 0.11
ERS2716840 ERP110263 Feces C57BL/6 Envigo Laboratory 67 0.11
ERS2716622 ERP110263 Stomach C57BL/6 Envigo Laboratory 66 0.10
SRS940678 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 29 0.10
ERS2716644 ERP110263 Stomach C57BL/6 Envigo Laboratory 62 0.10
SRS5679068 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 5 0.10
SRS2529842 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 27 0.10
SRS941212 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 27 0.10
SRS2529799 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 21 0.09
SRS2290164 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 12 0.08
ERS2715902 ERP110263 Cecum C57BL/6 Envigo Laboratory 46 0.08
SRS876932 SRP056326 Feces BALB/c Envigo Laboratory 46 0.08
SRS1945769 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 43 0.07
ERS2716186 ERP110263 Duodenum C57BL/6 Envigo Laboratory 12 0.07
ERS2715991 ERP110263 Cecum C57BL/6 Envigo Laboratory 16 0.06
ERS2716164 ERP110263 Duodenum C57BL/6 Envigo Laboratory 8 0.06
ERS2716838 ERP110263 Feces C57BL/6 Envigo Laboratory 35 0.06
SRS941670 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 15 0.06
ERS2715790 ERP110263 Colon C57BL/6 Envigo Laboratory 27 0.05
ERS2715868 ERP110263 Colon C57BL/6 Envigo Laboratory 24 0.05
SRS2529846 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 20 0.05
SRS2529819 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 10 0.05
ERS2716689 ERP110263 Stomach C57BL/6 Envigo Laboratory 24 0.05
ERS2716175 ERP110263 Duodenum C57BL/6 Envigo Laboratory 29 0.05
SRS876844 SRP056326 Feces C57BL/6 Envigo Laboratory 24 0.04
ERS2715980 ERP110263 Cecum C57BL/6 Envigo Laboratory 20 0.04
ERS2715857 ERP110263 Colon C57BL/6 Envigo Laboratory 8 0.04
ERS2715779 ERP110263 Colon C57BL/6 Envigo Laboratory 27 0.04
ERS2716722 ERP110263 Stomach C57BL/6 Envigo Laboratory 15 0.04
ERS2716002 ERP110263 Cecum C57BL/6 Envigo Laboratory 8 0.03
ERS2716555 ERP110263 Jejunum C57BL/6 Envigo Laboratory 16 0.03
ERS2716841 ERP110263 Feces C57BL/6 Envigo Laboratory 23 0.03
SRS876807 SRP056326 Feces C57BL/6 Envigo Laboratory 21 0.03
ERS2715924 ERP110263 Cecum C57BL/6 Envigo Laboratory 21 0.03
SRS2290167 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.03
ERS2716655 ERP110263 Stomach C57BL/6 Envigo Laboratory 15 0.03
ERS2715801 ERP110263 Colon C57BL/6 Envigo Laboratory 15 0.03
ERS2715846 ERP110263 Colon C57BL/6 Envigo Laboratory 13 0.03
ERS2716633 ERP110263 Stomach C57BL/6 Envigo Laboratory 16 0.03
ERS2715935 ERP110263 Cecum C57BL/6 Envigo Laboratory 16 0.03
ERS2716842 ERP110263 Feces C57BL/6 Envigo Laboratory 18 0.03
ERS2716086 ERP110263 Duodenum C57BL/6 Envigo Laboratory 12 0.02
SRS2529852 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 5 0.02
ERS2716119 ERP110263 Duodenum C57BL/6 Envigo Laboratory 12 0.02
SRS1099728 SRP064488 Feces C57BL/6 Taconic Biosciences Laboratory 2 0.02
ERS2716610 ERP110263 Jejunum C57BL/6 Envigo Laboratory 8 0.02
ERS2716566 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.02
ERS2715812 ERP110263 Colon C57BL/6 Envigo Laboratory 12 0.02
SRS876883 SRP056326 Feces BALB/c Envigo Laboratory 10 0.02
SRS876952 SRP056326 Feces C57BL/6 Envigo Laboratory 10 0.02
ERS2716320 ERP110263 Ileum C57BL/6 Envigo Laboratory 4 0.02
ERS2716108 ERP110263 Duodenum C57BL/6 Envigo Laboratory 10 0.02
ERS2716711 ERP110263 Stomach C57BL/6 Envigo Laboratory 7 0.02
ERS2716097 ERP110263 Duodenum C57BL/6 Envigo Laboratory 5 0.02
ERS2716143 ERP110263 Duodenum C57BL/6 Envigo Laboratory 10 0.02
SRS2290014 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290211 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2715879 ERP110263 Colon C57BL/6 Envigo Laboratory 4 0.01
ERS2716231 ERP110263 Ileum C57BL/6 Envigo Laboratory 2 0.01
ERS2715913 ERP110263 Cecum C57BL/6 Envigo Laboratory 7 0.01
ERS2716144 ERP110263 Duodenum C57BL/6 Envigo Laboratory 7 0.01
ERS2716197 ERP110263 Duodenum C57BL/6 Envigo Laboratory 5 0.01
ERS2716309 ERP110263 Ileum C57BL/6 Envigo Laboratory 4 0.01
SRS2290081 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.01
ERS2716700 ERP110263 Stomach C57BL/6 Envigo Laboratory 5 0.01
ERS2716421 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.01
ERS2715946 ERP110263 Cecum C57BL/6 Envigo Laboratory 5 0.01
ERS2716839 ERP110263 Feces C57BL/6 Envigo Laboratory 5 0.01
ERS2716510 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.01
SRS3667870 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.01
ERS2716013 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.01
ERS2716146 ERP110263 Duodenum C57BL/6 Envigo Laboratory 2 0.01
SRS3667869 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS3667868 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.00
ERS2715892 ERP110263 Colon C57BL/6 Envigo Laboratory 2 0.00
SRS1945768 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS1945771 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS1945775 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS2290106 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
ERS2716744 ERP110263 Stomach C57BL/6 Envigo Laboratory 2 0.00
ERS2715890 ERP110263 Colon C57BL/6 Envigo Laboratory 2 0.00
SRS876949 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
ERS2716614 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716488 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716846 ERP110263 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS876788 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876888 SRP056326 Feces BALB/c Envigo Laboratory 2 0.00
SRS876898 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876940 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00